Researchers from the group of Eva van Rooij at the Hubrecht Institute have used advanced sequencing technology to better understand the heart disease arrhythmogenic cardiomyopathy, in which heart muscle tissue is replaced by fat cells. Using explanted human hearts, they found regions in which heart muscle was actively degenerated and identified a new gene, ZBTB11, that drives heart muscle cell degradation. The results were published in Cardiovascular Research on 17 May 2022.
Arrhythmogenic cardiomyopathy (ACM) is a familial heart disease in which heart muscle tissue is replaced by fat cells. It can lead to life-threatening, irregular heartbeats. Currently, no therapy exists to cure arrhythmogenic cardiomyopathy and patients may ultimately need a heart transplantation. Therefore, the group of Eva van Rooij at the Hubrecht Institute collaborated with the UMC Utrecht to better understand the process of heart muscle degeneration in ACM, to ultimately contribute to the identification of new therapeutic targets to treat the disease.
Previous studies on ACM used methods that take a snapshot of the gene expression in diseased tissue to aim at understanding what happens in the disease, but lacked the spatial resolution that is required to identify local differences within the heart. Therefore, the Eva van Rooij and her team collaborated with the group of Alexander van Oudenaarden to use a technique called Tomo-Seq, which enabled the researchers to study gene expression within different areas of the heart. It turned out that knowing the location of the cells with changed gene activity was key to the discovery of novel areas of heart muscle degeneration.
The researchers used explanted hearts from ACM patients who received a heart transplantation. Heart disease is often studied in cultured cells or animal models, since the use of patient heart tissue is usually not possible. However, due to a collaboration with Aryan Vink from the Pathology Department of UMC Utrecht, the researchers had access to one of the largest and best documented heart tissue biobanks of the world. This gave them the unique opportunity to study the disease process in patient material. The researchers were able to closely look at the patient heart muscle cells that are degenerating, and identified new genes that may play an important role in this process. Among these genes is the transcription factor ZBTB11, a gene that was not previously known to be involved in arrhythmogenic cardiomyopathy.
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